| Name | Version | Summary | date |
| hydra-genetics |
2.0.1 |
Helper tools for use with hydra-genetics pipelines. |
2024-04-25 12:35:31 |
| splicekit |
0.6 |
splicekit: comprehensive toolkit for splicing analysis from short-read RNA-seq |
2024-04-25 08:54:31 |
| tajimas-d |
2.0.2 |
Computes Tajimas D, the Pi- or Watterson-Estimator for multiple sequences. |
2024-04-25 08:25:59 |
| pipestat |
0.9.1 |
A pipeline results reporter |
2024-04-24 21:22:35 |
| metacoag |
1.2.0 |
MetaCoAG: Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs |
2024-04-24 05:54:11 |
| pairtools |
1.1.0 |
CLI tools to process mapped Hi-C data |
2024-04-23 19:21:37 |
| protkit |
0.2.4 |
A unified toolkit for structural protein engineering. |
2024-04-23 13:52:20 |
| OGU |
1.52 |
Organelle Genome Utilities |
2024-04-23 12:03:41 |
| cooltools |
0.7.0 |
Analysis tools for genomic interaction data stored in .cool format |
2024-04-22 18:42:06 |
| graphbin2 |
1.2.3 |
GraphBin2: Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs |
2024-04-22 07:00:48 |
| pephubclient |
0.4.2 |
PEPhub command line interface. |
2024-04-16 18:35:46 |
| jms-metabolite-services |
0.5.8 |
conversion, search of metabolic models and metabolomics data |
2024-04-15 19:44:20 |
| grnm |
0.6 |
A comprehensive tool for gene regulatory network modeling. |
2024-04-15 01:23:22 |
| prefixmaps |
0.2.4 |
A python library for retrieving semantic prefix maps |
2024-04-14 23:40:13 |
| pybbi |
0.4.0 |
Python bindings to the UCSC source for Big Binary Indexed (bigWig/bigBed) files. |
2024-04-14 11:55:51 |
| tcrpmhcdataset |
0.1.0 |
Handling Many-to-many TCR::Peptide-MHC Data |
2024-04-13 23:02:13 |
| omicidx |
1.11.3 |
The OmicIDX project collects, reprocesses, and then republishes metadata from multiple public genomics repositories. Included are the NCBI SRA, Biosample, and GEO databases. Publication is via the cloud data warehouse platform Bigquery, a set of performant search and retrieval APIs, and a set of json-format files for easy incorporation into other projects. |
2024-04-12 13:17:54 |
| nafcodec |
0.2.0 |
PyO3 bindings and Python interface to nafcodec, an encoder/decoder for Nucleotide Archive Format (NAF) files. |
2024-04-10 09:49:14 |
| sourmash |
4.8.8 |
tools for comparing biological sequences with k-mer sketches |
2024-04-09 23:09:22 |
| antidb |
2024.4.6 |
The simplest index-and-search engine for huge multiline text files. Focused primarily on bioinformatics. Inspired by tabix, but isn't its replacement. Written in Python. Works on top of Zstandard Seekable & pyzstd SeekableZstdFile. |
2024-04-06 21:27:33 |